sci-biology/wise
Intelligent algorithms for DNA searches
ChangeLog
commit 3072d10e6c4f21185d53e4728d0fa0fad58537e7
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Dec 10 22:20:38 2017 +0000
Update Manifests to new hashes
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit bce61aa3e4fe85fe411df858eb30ebe72a3a8f88
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Nov 18 20:39:44 2017 +0000
Consistently ident with tabs
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit f69e73182fc7cdc6c600a72fceb88ae1626db25d
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Feb 25 16:50:59 2017 +0000
Drop leftover from CVS in HEADER
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 96bd0833fd10983de60beb60ff8b1267348fe8bb
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Tue Jan 10 18:13:50 2017 +0100
sci-biology/wise: add keywords
Package-Manager: Portage-2.3.3, Repoman-2.3.1
commit 7490080c8499c8762691ecd64e6ba8bc9f2dc3cd
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Tue Jan 10 18:13:10 2017 +0100
sci-biology/wise: fix slot operator
Package-Manager: Portage-2.3.3, Repoman-2.3.1
commit 536ecc57f40abd1f4f11c9c398df530d10838fb4
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Tue Jan 10 17:37:01 2017 +0100
sci-biology/wise: version bump, add patches from wise_2.4.1-19_debian
Dropped tcsh dependence because that is removed by a path.
We do not call 'make perl' so maybe could drop perl dependency as well?
Wether the bundled while modified hmmer-2 sources can be dropped is
not clear but it seems the only callers of hmmer-2 binaries are in
automated tests. Not sure about libhmmer.a needs.
Notably, sci-biology/hmmer-2.3.2-r4 provides /usr/lib64/libhmmer2.a
while sci-biology/hmmer-3.1_beta2 provides /usr/lib64/libhmmer.a.
Package-Manager: Portage-2.3.3, Repoman-2.3.1
commit 057a98c5e6346d6696fcc7b0ec8fefc9e826245f
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:53:09 2016 +0100
metadata.xml: Set type
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit b9d823e1ea1018d1356a0c18a083eab4d5ea6d8d
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:50:12 2016 +0100
metadata.xml: convert hard -> proj
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 2ef24e800910be3786e23a31a0217ba0f38659f8
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Jan 7 15:10:39 2016 +0100
Drop ChangeLogs in favour of commit messages
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 6271f0c55cbb6af7fe88ae1ec9d7dbdedd562565
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Aug 17 08:53:12 2015 +0200
Convert all $Header$ to $Id$ tags as it has be done in gentoo.git
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit a891336052fb27fd9f3f82e33c30f0984f50ea54
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:25:27 2015 +0200
Revert "Gentoo does https by default now"
This reverts commit 98718494343af4990facdefb0033471686e975a6.
commit 98718494343af4990facdefb0033471686e975a6
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:14:25 2015 +0200
Gentoo does https by default now
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit a4f1661dd0ed743fd5ea4e21edc558c83fbc5dd6
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Sun May 10 00:55:35 2015 +0200
sci-biology/wise: version bump, new HOMEPAGE, SRC_URI, does not compile, the former patches need to be updated as well
Package-Manager: portage-2.2.18
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Dec 10 22:20:38 2017 +0000
Update Manifests to new hashes
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit bce61aa3e4fe85fe411df858eb30ebe72a3a8f88
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Nov 18 20:39:44 2017 +0000
Consistently ident with tabs
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit f69e73182fc7cdc6c600a72fceb88ae1626db25d
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Feb 25 16:50:59 2017 +0000
Drop leftover from CVS in HEADER
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 96bd0833fd10983de60beb60ff8b1267348fe8bb
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Tue Jan 10 18:13:50 2017 +0100
sci-biology/wise: add keywords
Package-Manager: Portage-2.3.3, Repoman-2.3.1
commit 7490080c8499c8762691ecd64e6ba8bc9f2dc3cd
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Tue Jan 10 18:13:10 2017 +0100
sci-biology/wise: fix slot operator
Package-Manager: Portage-2.3.3, Repoman-2.3.1
commit 536ecc57f40abd1f4f11c9c398df530d10838fb4
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Tue Jan 10 17:37:01 2017 +0100
sci-biology/wise: version bump, add patches from wise_2.4.1-19_debian
Dropped tcsh dependence because that is removed by a path.
We do not call 'make perl' so maybe could drop perl dependency as well?
Wether the bundled while modified hmmer-2 sources can be dropped is
not clear but it seems the only callers of hmmer-2 binaries are in
automated tests. Not sure about libhmmer.a needs.
Notably, sci-biology/hmmer-2.3.2-r4 provides /usr/lib64/libhmmer2.a
while sci-biology/hmmer-3.1_beta2 provides /usr/lib64/libhmmer.a.
Package-Manager: Portage-2.3.3, Repoman-2.3.1
commit 057a98c5e6346d6696fcc7b0ec8fefc9e826245f
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:53:09 2016 +0100
metadata.xml: Set type
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit b9d823e1ea1018d1356a0c18a083eab4d5ea6d8d
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:50:12 2016 +0100
metadata.xml: convert hard -> proj
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 2ef24e800910be3786e23a31a0217ba0f38659f8
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Jan 7 15:10:39 2016 +0100
Drop ChangeLogs in favour of commit messages
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 6271f0c55cbb6af7fe88ae1ec9d7dbdedd562565
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Aug 17 08:53:12 2015 +0200
Convert all $Header$ to $Id$ tags as it has be done in gentoo.git
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit a891336052fb27fd9f3f82e33c30f0984f50ea54
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:25:27 2015 +0200
Revert "Gentoo does https by default now"
This reverts commit 98718494343af4990facdefb0033471686e975a6.
commit 98718494343af4990facdefb0033471686e975a6
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:14:25 2015 +0200
Gentoo does https by default now
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit a4f1661dd0ed743fd5ea4e21edc558c83fbc5dd6
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Sun May 10 00:55:35 2015 +0200
sci-biology/wise: version bump, new HOMEPAGE, SRC_URI, does not compile, the former patches need to be updated as well
Package-Manager: portage-2.2.18