sci-biology/pileup
SSAHA2-based pipeline to align reads
ChangeLog
commit 717a929b44dd20599cfb826e521397cebda099ce
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Wed Feb 3 05:49:05 2021 +0100
sci-biology/pileup: EAPI bump
Package-Manager: Portage-3.0.14, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
commit 5262c63cac26f9a2ff857d3f00750ed769957080
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Tue Jan 19 17:26:40 2021 +0100
sci-biology/pileup: properly name tarball
Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
commit 3072d10e6c4f21185d53e4728d0fa0fad58537e7
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Dec 10 22:20:38 2017 +0000
Update Manifests to new hashes
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit bce61aa3e4fe85fe411df858eb30ebe72a3a8f88
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Nov 18 20:39:44 2017 +0000
Consistently ident with tabs
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit f69e73182fc7cdc6c600a72fceb88ae1626db25d
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Feb 25 16:50:59 2017 +0000
Drop leftover from CVS in HEADER
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit e0bb430dd8c078ea0aa22268eba26a47febe7b31
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Feb 3 16:55:14 2017 +0000
Drop all trailing whitespaces
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 01a5062038a8bc55319bb81222c9f1bcd369cb20
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Feb 3 16:27:18 2017 +0000
Shorten all DESCRIPTION to <80 chars
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 057a98c5e6346d6696fcc7b0ec8fefc9e826245f
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:53:09 2016 +0100
metadata.xml: Set type
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit b9d823e1ea1018d1356a0c18a083eab4d5ea6d8d
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:50:12 2016 +0100
metadata.xml: convert hard -> proj
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 215494670034cdd35fefed02a709f18b36b88f64
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Jan 22 20:18:53 2016 +0100
Fix usage of die with ebuild_helper
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 2ef24e800910be3786e23a31a0217ba0f38659f8
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Jan 7 15:10:39 2016 +0100
Drop ChangeLogs in favour of commit messages
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 6ab11cecb4abbedda99c81847ad300601de345bc
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Sep 23 14:47:53 2015 +0200
Use default functions
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 31948f21ddfb503f0c25d80ee1f38ba348fbc69d
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Sep 23 12:34:09 2015 +0200
Drop unnecessary die from emake
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 6271f0c55cbb6af7fe88ae1ec9d7dbdedd562565
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Aug 17 08:53:12 2015 +0200
Convert all $Header$ to $Id$ tags as it has be done in gentoo.git
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit a891336052fb27fd9f3f82e33c30f0984f50ea54
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:25:27 2015 +0200
Revert "Gentoo does https by default now"
This reverts commit 98718494343af4990facdefb0033471686e975a6.
commit 98718494343af4990facdefb0033471686e975a6
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:14:25 2015 +0200
Gentoo does https by default now
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit fcdfc1c08e92743a81214d3e10ccd4d335f883f1
Author: Christoph Junghans <ottxor@gentoo.org>
Date: Mon Sep 15 21:03:33 2014 -0600
added license
Package-Manager: portage-2.2.8-r1
commit 79e7216e5ab7821f6dd9a500624403074b36a074
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Mon Mar 24 02:34:09 2014 +0100
sci-biology/pileup: dropped KEYWORDS due to misisng LICENSE
commit 27b9edadf33754b1305771c3b657ed21c05b1267
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Mon Mar 24 02:20:53 2014 +0100
sci-biology/pileup: new package; a pileup pipeline used along SSAHA2
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Wed Feb 3 05:49:05 2021 +0100
sci-biology/pileup: EAPI bump
Package-Manager: Portage-3.0.14, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
commit 5262c63cac26f9a2ff857d3f00750ed769957080
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Tue Jan 19 17:26:40 2021 +0100
sci-biology/pileup: properly name tarball
Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
commit 3072d10e6c4f21185d53e4728d0fa0fad58537e7
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Dec 10 22:20:38 2017 +0000
Update Manifests to new hashes
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit bce61aa3e4fe85fe411df858eb30ebe72a3a8f88
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Nov 18 20:39:44 2017 +0000
Consistently ident with tabs
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit f69e73182fc7cdc6c600a72fceb88ae1626db25d
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Feb 25 16:50:59 2017 +0000
Drop leftover from CVS in HEADER
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit e0bb430dd8c078ea0aa22268eba26a47febe7b31
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Feb 3 16:55:14 2017 +0000
Drop all trailing whitespaces
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 01a5062038a8bc55319bb81222c9f1bcd369cb20
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Feb 3 16:27:18 2017 +0000
Shorten all DESCRIPTION to <80 chars
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 057a98c5e6346d6696fcc7b0ec8fefc9e826245f
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:53:09 2016 +0100
metadata.xml: Set type
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit b9d823e1ea1018d1356a0c18a083eab4d5ea6d8d
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:50:12 2016 +0100
metadata.xml: convert hard -> proj
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 215494670034cdd35fefed02a709f18b36b88f64
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Jan 22 20:18:53 2016 +0100
Fix usage of die with ebuild_helper
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 2ef24e800910be3786e23a31a0217ba0f38659f8
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Jan 7 15:10:39 2016 +0100
Drop ChangeLogs in favour of commit messages
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 6ab11cecb4abbedda99c81847ad300601de345bc
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Sep 23 14:47:53 2015 +0200
Use default functions
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 31948f21ddfb503f0c25d80ee1f38ba348fbc69d
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Sep 23 12:34:09 2015 +0200
Drop unnecessary die from emake
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit 6271f0c55cbb6af7fe88ae1ec9d7dbdedd562565
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Aug 17 08:53:12 2015 +0200
Convert all $Header$ to $Id$ tags as it has be done in gentoo.git
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit a891336052fb27fd9f3f82e33c30f0984f50ea54
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:25:27 2015 +0200
Revert "Gentoo does https by default now"
This reverts commit 98718494343af4990facdefb0033471686e975a6.
commit 98718494343af4990facdefb0033471686e975a6
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:14:25 2015 +0200
Gentoo does https by default now
Signed-off-by: Justin Lecher <jlec@gentoo.org>
commit fcdfc1c08e92743a81214d3e10ccd4d335f883f1
Author: Christoph Junghans <ottxor@gentoo.org>
Date: Mon Sep 15 21:03:33 2014 -0600
added license
Package-Manager: portage-2.2.8-r1
commit 79e7216e5ab7821f6dd9a500624403074b36a074
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Mon Mar 24 02:34:09 2014 +0100
sci-biology/pileup: dropped KEYWORDS due to misisng LICENSE
commit 27b9edadf33754b1305771c3b657ed21c05b1267
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Mon Mar 24 02:20:53 2014 +0100
sci-biology/pileup: new package; a pileup pipeline used along SSAHA2