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sci-biology/pileup

SSAHA2-based pipeline to align reads

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commit 717a929b44dd20599cfb826e521397cebda099ce
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Wed Feb 3 05:49:05 2021 +0100

sci-biology/pileup: EAPI bump

Package-Manager: Portage-3.0.14, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>

commit 5262c63cac26f9a2ff857d3f00750ed769957080
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Tue Jan 19 17:26:40 2021 +0100

sci-biology/pileup: properly name tarball

Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>

commit 3072d10e6c4f21185d53e4728d0fa0fad58537e7
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Dec 10 22:20:38 2017 +0000

Update Manifests to new hashes

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit bce61aa3e4fe85fe411df858eb30ebe72a3a8f88
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Nov 18 20:39:44 2017 +0000

Consistently ident with tabs

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit f69e73182fc7cdc6c600a72fceb88ae1626db25d
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Feb 25 16:50:59 2017 +0000

Drop leftover from CVS in HEADER

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit e0bb430dd8c078ea0aa22268eba26a47febe7b31
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Feb 3 16:55:14 2017 +0000

Drop all trailing whitespaces

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 01a5062038a8bc55319bb81222c9f1bcd369cb20
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Feb 3 16:27:18 2017 +0000

Shorten all DESCRIPTION to <80 chars

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 057a98c5e6346d6696fcc7b0ec8fefc9e826245f
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:53:09 2016 +0100

metadata.xml: Set type

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit b9d823e1ea1018d1356a0c18a083eab4d5ea6d8d
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:50:12 2016 +0100

metadata.xml: convert hard -> proj

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 215494670034cdd35fefed02a709f18b36b88f64
Author: Justin Lecher <jlec@gentoo.org>
Date: Fri Jan 22 20:18:53 2016 +0100

Fix usage of die with ebuild_helper

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 2ef24e800910be3786e23a31a0217ba0f38659f8
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Jan 7 15:10:39 2016 +0100

Drop ChangeLogs in favour of commit messages

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 6ab11cecb4abbedda99c81847ad300601de345bc
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Sep 23 14:47:53 2015 +0200

Use default functions

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 31948f21ddfb503f0c25d80ee1f38ba348fbc69d
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Sep 23 12:34:09 2015 +0200

Drop unnecessary die from emake

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 6271f0c55cbb6af7fe88ae1ec9d7dbdedd562565
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Aug 17 08:53:12 2015 +0200

Convert all $Header$ to $Id$ tags as it has be done in gentoo.git

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit a891336052fb27fd9f3f82e33c30f0984f50ea54
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:25:27 2015 +0200

Revert "Gentoo does https by default now"

This reverts commit 98718494343af4990facdefb0033471686e975a6.

commit 98718494343af4990facdefb0033471686e975a6
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:14:25 2015 +0200

Gentoo does https by default now

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit fcdfc1c08e92743a81214d3e10ccd4d335f883f1
Author: Christoph Junghans <ottxor@gentoo.org>
Date: Mon Sep 15 21:03:33 2014 -0600

added license

Package-Manager: portage-2.2.8-r1

commit 79e7216e5ab7821f6dd9a500624403074b36a074
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Mon Mar 24 02:34:09 2014 +0100

sci-biology/pileup: dropped KEYWORDS due to misisng LICENSE

commit 27b9edadf33754b1305771c3b657ed21c05b1267
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Mon Mar 24 02:20:53 2014 +0100

sci-biology/pileup: new package; a pileup pipeline used along SSAHA2