sci-biology/bamtools
A programmer's API and an end-user's toolkit for handling BAM files
ChangeLog
commit 5fd09132b758233e1f9c24704e832f96df19683b
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Wed Mar 1 00:13:24 2017 -0700
merged from funtoo-staging
merged:
funtoo-staging: d605f51aadda4424f4d767132f6c9c99218c6f66
commit 5d891b60a0b55613a7ec57541ca89cbe70cbdb1d
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Thu Dec 15 23:53:48 2016 -0700
merged from funtoo-staging
merged:
funtoo-staging: 6114c59a51af06f7149682ca4fec9f579f9cf195
commit 1fa6790e9c70af6051c22ac2814d3b91977566bd
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Thu Dec 15 08:20:44 2016 -0700
merged from funtoo-staging
merged:
funtoo-staging: 1f638ff9ac55af802105aaa3e5247b92be68aa1e
commit 3549ddbcd43f6a95226fc79bcbed34a71973b900
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Wed Jan 27 01:12:39 2016 -0700
merged from funtoo-staging
merged:
funtoo-staging: 3c6d53b50924e85ee45686ebd1cde275bd1895fc
commit 3453d347a8e93b223e2574ccf4b534b43d445c62
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Dec 15 09:39:24 2015 -0700
merged from funtoo-staging
merged:
funtoo-staging: cb836dcc04d1f46719b499b08481adc6d83b036c
commit 598ded5ea89821a0d724c8993405c45042b3d82e
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Aug 25 00:26:24 2015 +0000
merged from funtoo-staging
merged:
funtoo-staging: 4322619cb1872cc9dbe0fa1fdcd184a3642bac32
commit 0099bee1c097c4e9ad62cbba61b9ef6c5abc8471
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Mon Aug 24 12:27:16 2015 +0000
merged from funtoo-staging
merged:
funtoo-staging: ccd94e33817483691f8e043d7189fe44803aa808
commit db1218d188a44a9f2d76e10fcdde884d5a2d80bb
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Sun Aug 16 17:02:07 2015 +0000
merged from funtoo-staging
merged:
funtoo-staging: 4e1ffcb9c520bc5d1dafc0d186ade00102c3b594
commit 89cc3c4a2ec900bafe261c635084614d240105ec
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Aug 11 04:10:59 2015 +0000
merged from funtoo-staging
merged:
funtoo-staging: 90795ffd7b6d717be93874c2cfb775f3c3bb5169
commit c1d11dd856fcae8c424ead2d5ce3185f30653dec
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Mon Jun 15 20:25:08 2015 +0000
merged from funtoo-staging
merged:
funtoo-staging: 8713cf9b5791d882d25257e9642bbb92202ce9f7
commit 19b3b52821f7390f265c6013f957e3522cf9f44f
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Sep 17 12:52:50 2013 -0600
glorious funtoo updates
merged:
funtoo-overlay: 842ddbbf2b8461928d930e7b51c35059554edbdb
foo-overlay: 3151d1bc3adb6adb4f8004533d11c5264a43eb0b
bar-overlay: 09dbf39ca3130b8fa3d3c049518b56edd8dffcbe
mate: 7cb16a7dca441a56d872157ee6e19c46fe56ce8b
sabayon-for-gentoo: e3f63e065e9817758401f48dd3f9055541d590ad
commit 30f42b198b4956ae4b718abbd360d5d4a447ca2f
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Aug 27 12:52:56 2013 -0600
glorious funtoo updates
merged:
funtoo-overlay: 6edb2d4bc9c6959d609d1587135ecc8fdff346da
foo-overlay: 3151d1bc3adb6adb4f8004533d11c5264a43eb0b
bar-overlay: 09dbf39ca3130b8fa3d3c049518b56edd8dffcbe
flora: da07848913dd5f3d08d4b662120c643fe83796bd
mate: fb8000cb819518fdd52da63338405236d071c929
sabayon-for-gentoo: 83e32d23fda580e711f4f2db7ca0be8a06446a5c
commit 3d8c02334b65733e2d83e5e25617b4908361bbc2
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Sun Mar 17 13:45:23 2013 -0600
glorious funtoo updates
merged:
funtoo-overlay: c983d06f29405935b76c197e80d990ca69afa628
foo-overlay: f7dfe75b6d07da7d211e64f6fc213b9c68f6bd49
bar-overlay: 0093f8c8d47e0fff61b04424d49241600c99e539
flora: dbd185f49bc8af154f38e18958ceb41d6cf27078
for-gentoo: 94f75b16ecfb363c5629fad19a06de20aca10873
commit 8d1e9dcc4a2640d76945eeeb4239e18c0988f139
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Mon Mar 11 13:40:24 2013 -0600
glorious funtoo updates
merged:
funtoo-overlay: b0221d59abf45bea4209f87e2f54769db579b736
foo-overlay: f7dfe75b6d07da7d211e64f6fc213b9c68f6bd49
bar-overlay: f1e9085ee695ff5b6ce57d430d6b224aaf4fa0a6
flora: e9070ed3cccc2b75d43f972cde120c1d02e4558c
for-gentoo: a043151109035cd80f145b94dcd76f2fb7601f61
commit 7864428ab44948464d406810c4149245c299effd
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Fri Mar 1 13:23:56 2013 -0700
glorious funtoo updates
merged:
funtoo-overlay: c480afaeccebac782a5c15f95544f6bd9784de71
foo-overlay: e258a2c560b99d0e05d6520058510503ec7206ca
bar-overlay: f1e9085ee695ff5b6ce57d430d6b224aaf4fa0a6
flora: 9be3a8e4438918b7f2a80779b49d084ad879b22e
for-gentoo: e45c7c296f6e87237eb5eaec7e60f3f89cad3132
commit 751dc608bc6eec425814a48269e9dca9f7711e9a
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Fri Mar 1 00:46:03 2013 -0700
glorious funtoo updates
merged:
funtoo-overlay: e6415e1240b1950362992327eaab1e81b01d33ed
foo-overlay: e258a2c560b99d0e05d6520058510503ec7206ca
bar-overlay: f1e9085ee695ff5b6ce57d430d6b224aaf4fa0a6
flora: 9be3a8e4438918b7f2a80779b49d084ad879b22e
for-gentoo: 8765b56c88ab58d2088e3fb46a006f24ae7bb2e6
commit 01c09f29777b1c6f34a5591e4ecb680646138bc5
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Mon Jan 28 18:50:08 2013 -0700
glorious funtoo updates
merged:
funtoo-overlay: 1cd569a66133ed913c2329183cfc19c162c5c574
foo-overlay: 4ee427c6573d50d9ce03f6671dce87274c57ee9f
bar-overlay: f1e9085ee695ff5b6ce57d430d6b224aaf4fa0a6
flora: cc31343a95ac9fd63bfc06fb6f27c86407f367fe
for-gentoo: 9f867277dd44351ab9445c69fec73f432d39fd7c
commit 5c5655374b4595eecb704e36920b04331a43611e
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Thu Apr 26 12:43:10 2012 -0600
glorious funtoo updates
merged:
gentoo: d41a2feb05fc648e10136650cfc7561cb4db17ef
funtoo-overlay: b8f71e2d5ee54ee6d9e6a43c3d842bfd9b02f2a5
foo-overlay: 456b688c3863d3f6862ad065b3200ec5c66e1814
bar-overlay: f4de124575d7b52467a0bfa4839a96eac3098528
flora: fc6e92d13d3d94f05ffab5be2171b0ceb0132e97
commit e2d30fcbef268bf5a15ded9c6f0ed83645619316
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Apr 24 00:38:50 2012 -0600
glorious funtoo updates
merged:
gentoo: a8835809c10d5bb0be12683e3e964aeb9d11bde0
funtoo-overlay: e5091b5ba52ca7313170c03f922d9e4b432352d6
foo-overlay: 6d128ac65f6ebc196314bc1fa6473281b3cae87c
bar-overlay: f4de124575d7b52467a0bfa4839a96eac3098528
flora: accfdee6ca9a368924940a87b0b5acf2e4d8029b
commit e5d70e5b045f3e26f610a2e5a0af27083f465f6b
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Sat Feb 25 12:21:29 2012 -0700
glorious funtoo updates
merged:
gentoo: 0aed44f602dd226349d71a9da5929e3bbdfd3045
funtoo-overlay: af4b692362a44f4851ea32888337629636dc539b
foo-overlay: a9846c03bdbef31d91fe4b73d64944584a202bd4
bar-overlay: 4b6579bdb26d820bd55e85488c8e5eb80d8e8011
flora: f8f4f155f58ba23d782edb525dbcf8c9599c0dcc
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Wed Mar 1 00:13:24 2017 -0700
merged from funtoo-staging
merged:
funtoo-staging: d605f51aadda4424f4d767132f6c9c99218c6f66
commit 5d891b60a0b55613a7ec57541ca89cbe70cbdb1d
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Thu Dec 15 23:53:48 2016 -0700
merged from funtoo-staging
merged:
funtoo-staging: 6114c59a51af06f7149682ca4fec9f579f9cf195
commit 1fa6790e9c70af6051c22ac2814d3b91977566bd
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Thu Dec 15 08:20:44 2016 -0700
merged from funtoo-staging
merged:
funtoo-staging: 1f638ff9ac55af802105aaa3e5247b92be68aa1e
commit 3549ddbcd43f6a95226fc79bcbed34a71973b900
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Wed Jan 27 01:12:39 2016 -0700
merged from funtoo-staging
merged:
funtoo-staging: 3c6d53b50924e85ee45686ebd1cde275bd1895fc
commit 3453d347a8e93b223e2574ccf4b534b43d445c62
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Dec 15 09:39:24 2015 -0700
merged from funtoo-staging
merged:
funtoo-staging: cb836dcc04d1f46719b499b08481adc6d83b036c
commit 598ded5ea89821a0d724c8993405c45042b3d82e
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Aug 25 00:26:24 2015 +0000
merged from funtoo-staging
merged:
funtoo-staging: 4322619cb1872cc9dbe0fa1fdcd184a3642bac32
commit 0099bee1c097c4e9ad62cbba61b9ef6c5abc8471
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Mon Aug 24 12:27:16 2015 +0000
merged from funtoo-staging
merged:
funtoo-staging: ccd94e33817483691f8e043d7189fe44803aa808
commit db1218d188a44a9f2d76e10fcdde884d5a2d80bb
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Sun Aug 16 17:02:07 2015 +0000
merged from funtoo-staging
merged:
funtoo-staging: 4e1ffcb9c520bc5d1dafc0d186ade00102c3b594
commit 89cc3c4a2ec900bafe261c635084614d240105ec
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Aug 11 04:10:59 2015 +0000
merged from funtoo-staging
merged:
funtoo-staging: 90795ffd7b6d717be93874c2cfb775f3c3bb5169
commit c1d11dd856fcae8c424ead2d5ce3185f30653dec
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Mon Jun 15 20:25:08 2015 +0000
merged from funtoo-staging
merged:
funtoo-staging: 8713cf9b5791d882d25257e9642bbb92202ce9f7
commit 19b3b52821f7390f265c6013f957e3522cf9f44f
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Sep 17 12:52:50 2013 -0600
glorious funtoo updates
merged:
funtoo-overlay: 842ddbbf2b8461928d930e7b51c35059554edbdb
foo-overlay: 3151d1bc3adb6adb4f8004533d11c5264a43eb0b
bar-overlay: 09dbf39ca3130b8fa3d3c049518b56edd8dffcbe
mate: 7cb16a7dca441a56d872157ee6e19c46fe56ce8b
sabayon-for-gentoo: e3f63e065e9817758401f48dd3f9055541d590ad
commit 30f42b198b4956ae4b718abbd360d5d4a447ca2f
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Aug 27 12:52:56 2013 -0600
glorious funtoo updates
merged:
funtoo-overlay: 6edb2d4bc9c6959d609d1587135ecc8fdff346da
foo-overlay: 3151d1bc3adb6adb4f8004533d11c5264a43eb0b
bar-overlay: 09dbf39ca3130b8fa3d3c049518b56edd8dffcbe
flora: da07848913dd5f3d08d4b662120c643fe83796bd
mate: fb8000cb819518fdd52da63338405236d071c929
sabayon-for-gentoo: 83e32d23fda580e711f4f2db7ca0be8a06446a5c
commit 3d8c02334b65733e2d83e5e25617b4908361bbc2
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Sun Mar 17 13:45:23 2013 -0600
glorious funtoo updates
merged:
funtoo-overlay: c983d06f29405935b76c197e80d990ca69afa628
foo-overlay: f7dfe75b6d07da7d211e64f6fc213b9c68f6bd49
bar-overlay: 0093f8c8d47e0fff61b04424d49241600c99e539
flora: dbd185f49bc8af154f38e18958ceb41d6cf27078
for-gentoo: 94f75b16ecfb363c5629fad19a06de20aca10873
commit 8d1e9dcc4a2640d76945eeeb4239e18c0988f139
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Mon Mar 11 13:40:24 2013 -0600
glorious funtoo updates
merged:
funtoo-overlay: b0221d59abf45bea4209f87e2f54769db579b736
foo-overlay: f7dfe75b6d07da7d211e64f6fc213b9c68f6bd49
bar-overlay: f1e9085ee695ff5b6ce57d430d6b224aaf4fa0a6
flora: e9070ed3cccc2b75d43f972cde120c1d02e4558c
for-gentoo: a043151109035cd80f145b94dcd76f2fb7601f61
commit 7864428ab44948464d406810c4149245c299effd
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Fri Mar 1 13:23:56 2013 -0700
glorious funtoo updates
merged:
funtoo-overlay: c480afaeccebac782a5c15f95544f6bd9784de71
foo-overlay: e258a2c560b99d0e05d6520058510503ec7206ca
bar-overlay: f1e9085ee695ff5b6ce57d430d6b224aaf4fa0a6
flora: 9be3a8e4438918b7f2a80779b49d084ad879b22e
for-gentoo: e45c7c296f6e87237eb5eaec7e60f3f89cad3132
commit 751dc608bc6eec425814a48269e9dca9f7711e9a
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Fri Mar 1 00:46:03 2013 -0700
glorious funtoo updates
merged:
funtoo-overlay: e6415e1240b1950362992327eaab1e81b01d33ed
foo-overlay: e258a2c560b99d0e05d6520058510503ec7206ca
bar-overlay: f1e9085ee695ff5b6ce57d430d6b224aaf4fa0a6
flora: 9be3a8e4438918b7f2a80779b49d084ad879b22e
for-gentoo: 8765b56c88ab58d2088e3fb46a006f24ae7bb2e6
commit 01c09f29777b1c6f34a5591e4ecb680646138bc5
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Mon Jan 28 18:50:08 2013 -0700
glorious funtoo updates
merged:
funtoo-overlay: 1cd569a66133ed913c2329183cfc19c162c5c574
foo-overlay: 4ee427c6573d50d9ce03f6671dce87274c57ee9f
bar-overlay: f1e9085ee695ff5b6ce57d430d6b224aaf4fa0a6
flora: cc31343a95ac9fd63bfc06fb6f27c86407f367fe
for-gentoo: 9f867277dd44351ab9445c69fec73f432d39fd7c
commit 5c5655374b4595eecb704e36920b04331a43611e
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Thu Apr 26 12:43:10 2012 -0600
glorious funtoo updates
merged:
gentoo: d41a2feb05fc648e10136650cfc7561cb4db17ef
funtoo-overlay: b8f71e2d5ee54ee6d9e6a43c3d842bfd9b02f2a5
foo-overlay: 456b688c3863d3f6862ad065b3200ec5c66e1814
bar-overlay: f4de124575d7b52467a0bfa4839a96eac3098528
flora: fc6e92d13d3d94f05ffab5be2171b0ceb0132e97
commit e2d30fcbef268bf5a15ded9c6f0ed83645619316
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Tue Apr 24 00:38:50 2012 -0600
glorious funtoo updates
merged:
gentoo: a8835809c10d5bb0be12683e3e964aeb9d11bde0
funtoo-overlay: e5091b5ba52ca7313170c03f922d9e4b432352d6
foo-overlay: 6d128ac65f6ebc196314bc1fa6473281b3cae87c
bar-overlay: f4de124575d7b52467a0bfa4839a96eac3098528
flora: accfdee6ca9a368924940a87b0b5acf2e4d8029b
commit e5d70e5b045f3e26f610a2e5a0af27083f465f6b
Author: Daniel Robbins <drobbins@funtoo.org>
Date: Sat Feb 25 12:21:29 2012 -0700
glorious funtoo updates
merged:
gentoo: 0aed44f602dd226349d71a9da5929e3bbdfd3045
funtoo-overlay: af4b692362a44f4851ea32888337629636dc539b
foo-overlay: a9846c03bdbef31d91fe4b73d64944584a202bd4
bar-overlay: 4b6579bdb26d820bd55e85488c8e5eb80d8e8011
flora: f8f4f155f58ba23d782edb525dbcf8c9599c0dcc