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sci-biology/bx-python

Library for rapid implementation of genome scale analyses

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  • bx-python-0.13.0
    ~amd64 ~x86
    test python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 debug

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    Overlay: science

ChangeLog

commit ce12d41df7b9ff0999b2998d407edb57abe7b9ea
Author: Michael Schubert <mschu.dev@gmail.com>
Date: Mon Nov 11 13:59:05 2024 +0000

sci-biology/bx-python: version bump 0.13.0

Signed-off-by: Michael Schubert <mschu.dev@gmail.com>
Closes: https://github.com/gentoo/sci/pull/1297
Signed-off-by: Nowa Ammerlaan <nowa@gentoo.org>

commit a164bf307ec935fd566a4342aa9b691dcb470964
Author: Michael Schubert <mschu.dev@gmail.com>
Date: Tue Jul 16 09:57:43 2024 +0000

sci-biology/bx-python: version bump 0.12.0, enable tests

Signed-off-by: Michael Schubert <mschu.dev@gmail.com>
Closes: https://github.com/gentoo/sci/pull/1287
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>

commit 62d83379b39a9745ed94de5296f3739dc9ead8c4
Author: Horea Christian <chr@chymera.eu>
Date: Fri Feb 17 16:10:37 2023 -0500

sci-biology/bx-python: remove bitbucket upstream metadata

Signed-off-by: Horea Christian <chr@chymera.eu>

commit eadc057d986704101528304a2e9bb331b050e78c
Author: Horea Christian <chr@chymera.eu>
Date: Fri Jan 13 04:30:29 2023 -0500

sci-biology/bx-python: attempting to enable tests

Signed-off-by: Horea Christian <chr@chymera.eu>

commit be1b86867b05d343a1303c1a7a0f2acf205824f5
Author: Horea Christian <chr@chymera.eu>
Date: Fri Jan 13 04:11:36 2023 -0500

sci-biology/bx-python: GH SRC_URI suffix

Signed-off-by: Horea Christian <chr@chymera.eu>

commit 8411b6dbba5a94a2e74255cf96c3bfa208f4b81a
Author: Horea Christian <chr@chymera.eu>
Date: Fri Jan 13 04:10:28 2023 -0500

sci-biology/bx-python: add 0.9.0

Signed-off-by: Horea Christian <chr@chymera.eu>

commit 0f1eeb5f8d889cc546f592e867cd64cf1c8d70e5
Author: Horea Christian <chr@chymera.eu>
Date: Fri Jan 13 04:07:51 2023 -0500

sci-biology/bx-python: updated PYTHON_COMPAT

Signed-off-by: Horea Christian <chr@chymera.eu>

commit b20587d17391fd67cf942830328eb1befffed609
Author: Jérôme Carretero <cJ@zougloub.eu>
Date: Sat Nov 12 05:12:23 2022 -0500

add github remote-id when possible

Semi-automatically done with:
https://gitlab.com/cJ/gentoo-bug-881037-github-reproducible-downloads
Closes: https://github.com/gentoo/sci/pull/1182

Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>

commit 6ab0a2a03037b813e057c38240e648e2e157ff8e
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Fri Feb 5 12:47:33 2021 +0100

sci-biology/bx-python: update homepage

Package-Manager: Portage-3.0.14, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>

commit 850d51ef8122e1fba897370534503313e4cda323
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Sun Jan 10 20:04:32 2021 +0100

sci-biology/bx-python: remove blocker with RSeQC

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>

commit 3916dc47dbb884e2a8b8f5b541f992d2e93ff98f
Author: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Date: Wed Dec 30 18:47:02 2020 +0100

sci-biology/bx-python: drop py3.6, add dep on cython and six

add blocker with RSeQC

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Signed-off-by: Horea Christian <chr@chymera.eu>
Closes https://github.com/gentoo/sci/pull/1007

commit 0c8e98814fa800e7960d92fc5c73fd4cdc30a5f3
Author: Horea Christian <chr@chymera.eu>
Date: Sat Sep 26 08:10:52 2020 -0400

sci-biology/bx-python: version bump 0.8.9

Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Horea Christian <chr@chymera.eu>

commit 3072d10e6c4f21185d53e4728d0fa0fad58537e7
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Dec 10 22:20:38 2017 +0000

Update Manifests to new hashes

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit bce61aa3e4fe85fe411df858eb30ebe72a3a8f88
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Nov 18 20:39:44 2017 +0000

Consistently ident with tabs

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 3199ec7737e923dc19479e5de7b31bb583071931
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Apr 30 11:12:48 2017 +0100

Cleanup remote IDs

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit f69e73182fc7cdc6c600a72fceb88ae1626db25d
Author: Justin Lecher <jlec@gentoo.org>
Date: Sat Feb 25 16:50:59 2017 +0000

Drop leftover from CVS in HEADER

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 10579e2234915ea0ec505f3f49896d00baf2c782
Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz>
Date: Fri Jul 1 12:49:09 2016 +0200

sci-biology/bx-python: record file collision issue with sci-biology/RSeQC

Package-Manager: portage-2.2.28

commit 057a98c5e6346d6696fcc7b0ec8fefc9e826245f
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:53:09 2016 +0100

metadata.xml: Set type

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit b9d823e1ea1018d1356a0c18a083eab4d5ea6d8d
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Jan 25 09:50:12 2016 +0100

metadata.xml: convert hard -> proj

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 2ef24e800910be3786e23a31a0217ba0f38659f8
Author: Justin Lecher <jlec@gentoo.org>
Date: Thu Jan 7 15:10:39 2016 +0100

Drop ChangeLogs in favour of commit messages

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 6271f0c55cbb6af7fe88ae1ec9d7dbdedd562565
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Aug 17 08:53:12 2015 +0200

Convert all $Header$ to $Id$ tags as it has be done in gentoo.git

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit a891336052fb27fd9f3f82e33c30f0984f50ea54
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:25:27 2015 +0200

Revert "Gentoo does https by default now"

This reverts commit 98718494343af4990facdefb0033471686e975a6.

commit 98718494343af4990facdefb0033471686e975a6
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 21 12:14:25 2015 +0200

Gentoo does https by default now

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit cf7e830a2958c50ad65f6ac99155e6a8ff79379f
Author: Justin Lecher <jlec@gentoo.org>
Date: Sun Jun 7 20:33:15 2015 +0200

sci-biology/bx-python: Add bitbucket to remote-id in metadata.xml

Package-Manager: portage-2.2.20

commit 824f62a4939472d0f85a6602a2ae461d11bd034b
Author: Justin Lecher <jlec@gentoo.org>
Date: Wed Jun 3 12:47:11 2015 +0200

Add pypi remote-id to metadata.xml

Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit 8e28a734e4f096e8b7611f18fe230d26099c5eb9
Author: Justin Lecher <jlec@gentoo.org>
Date: Mon Apr 13 08:10:46 2015 +0200

sci-biology/bx-python: Streamline ebuild

Package-Manager: portage-2.2.18
Signed-off-by: Justin Lecher <jlec@gentoo.org>

commit e1b5c57763609c4498f50be71829d7e3c0f58b8c
Author: layman <layman@localhost>
Date: Sun Apr 12 17:06:39 2015 +0100

sci-biology/bx-python: add bx-python

Package-Manager: portage-2.2.14-prefix