# Copyright 1999-2024 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=8 DISTUTILS_EXT=1 DISTUTILS_USE_PEP517=setuptools PYTHON_COMPAT=( python3_{10..12} ) DATA_URI="http://www.astropy.org/astropy-data" inherit distutils-r1 optfeature pypi DESCRIPTION="Core functionality for performing astrophysics with Python" HOMEPAGE="https://astropy.org" SRC_URI+=" doc? ( ${DATA_URI}/tutorials/FITS-Header/input_file.fits -> ${PN}-eo-input_file.fits ${DATA_URI}/tutorials/FITS-images/HorseHead.fits -> ${PN}-eo-HorseHead.fits ${DATA_URI}/tutorials/FITS-tables/chandra_events.fits -> ${PN}-eo-chandra_events.fits ${DATA_URI}/visualization/reprojected_sdss_g.fits.bz2 -> ${PN}-dv-reprojected_sdss_g.fits.bz2 ${DATA_URI}/visualization/reprojected_sdss_r.fits.bz2 -> ${PN}-dv-reprojected_sdss_r.fits.bz2 ${DATA_URI}/visualization/reprojected_sdss_i.fits.bz2 -> ${PN}-dv-reprojected_sdss_i.fits.bz2 ${DATA_URI}/allsky/allsky_rosat.fits -> ${PN}-dvw-allsky_rosat.fits ${DATA_URI}/galactic_center/gc_bolocam_gps.fits -> ${PN}-dvw-gc_bolocam_gps.fits ${DATA_URI}/galactic_center/gc_msx_e.fits -> ${PN}-dvw-gc_msx_e.fits ${DATA_URI}/l1448/l1448_13co.fits -> ${PN}-dvw-l1448_13co.fits ${DATA_URI}/galactic_center/gc_2mass_k.fits -> ${PN}-dw-gc_2mass_k.fits ${DATA_URI}/timeseries/kplr010666592-2009131110544_slc.fits -> ${PN}-dt-kplr010666592-2009131110544_slc.fits ) " LICENSE="BSD" SLOT="0" KEYWORDS="~amd64 ~x86" IUSE="doc examples intersphinx recommended" PROPERTIES="test_network" RESTRICT="test intersphinx? ( network-sandbox )" REQUIRED_USE="intersphinx? ( doc )" DEPEND=">=dev-libs/expat-2.5.0:0= >=dev-python/numpy-1.25:=[${PYTHON_USEDEP}] >=dev-python/pyerfa-2.0.1.1[${PYTHON_USEDEP}] >=sci-astronomy/erfa-2.0:0= >=sci-astronomy/wcslib-8.1:0= >=sci-libs/cfitsio-4.2.0:0= sys-libs/zlib:0= " RDEPEND="${DEPEND} >=dev-python/astropy-iers-data-0.2024.2.26.0.28.55[${PYTHON_USEDEP}] dev-python/configobj[${PYTHON_USEDEP}] dev-python/ply[${PYTHON_USEDEP}] >=dev-python/pyyaml-3.13[${PYTHON_USEDEP}] >=dev-python/packaging-19.0[${PYTHON_USEDEP}] recommended? ( >dev-python/matplotlib-3.5.2[${PYTHON_USEDEP}] >=dev-python/scipy-1.5[${PYTHON_USEDEP}] ) " BDEPEND="dev-python/extension-helpers[${PYTHON_USEDEP}] >=dev-python/cython-3.0.0[${PYTHON_USEDEP}] >=dev-python/setuptools-scm-6.2[${PYTHON_USEDEP}] doc? ( ${RDEPEND} >=dev-python/sphinx-astropy-1.9.1[${PYTHON_USEDEP},confv2] >=dev-python/sphinx-changelog-1.2.0[${PYTHON_USEDEP}] dev-python/sphinx-design[${PYTHON_USEDEP}] >=dev-python/jinja2-3.1.3[${PYTHON_USEDEP}] >dev-python/matplotlib-3.5.2[${PYTHON_USEDEP}] >=dev-python/scipy-1.5[${PYTHON_USEDEP}] >=dev-python/pytest-7.0[${PYTHON_USEDEP}] $(python_gen_cond_dep 'dev-python/tomli[${PYTHON_USEDEP}]' python3_10) media-gfx/graphviz ) test? ( dev-libs/libxml2 dev-python/beautifulsoup4[${PYTHON_USEDEP}] dev-python/bleach[${PYTHON_USEDEP}] dev-python/dask[${PYTHON_USEDEP}] dev-python/fitsio[${PYTHON_USEDEP}] dev-python/h5py[${PYTHON_USEDEP}] dev-python/html5lib[${PYTHON_USEDEP}] dev-python/ipython[${PYTHON_USEDEP}] >=dev-python/jplephem-2.15[${PYTHON_USEDEP}] dev-python/matplotlib[${PYTHON_USEDEP}] dev-python/mpmath[${PYTHON_USEDEP}] dev-python/objgraph[${PYTHON_USEDEP}] dev-python/pandas[${PYTHON_USEDEP}] >=dev-python/pytest-astropy-0.10[${PYTHON_USEDEP}] dev-python/pytest-mpl[${PYTHON_USEDEP}] dev-python/pyarrow[${PYTHON_USEDEP},parquet,snappy] dev-python/scipy[${PYTHON_USEDEP}] dev-python/skyfield[${PYTHON_USEDEP}] dev-python/s3fs[${PYTHON_USEDEP}] ) " PATCHES=( "${FILESDIR}/${PN}-6.0.0-system-configobj.patch" "${FILESDIR}/${PN}-6.0.0-system-ply.patch" # https://github.com/astropy/astropy/pull/16450 "${FILESDIR}/${PN}-6.0.1-fix-gcc14.patch" ) # TODO: Fix this # NameError: name 'disabled_intersphinx_mapping' is not defined #distutils_enable_sphinx docs \ # dev-python/sphinx-astropy \ # dev-python/pyyaml \ # dev-python/scipy \ # dev-python/pytest EPYTEST_XDIST=1 distutils_enable_tests pytest python_prepare_all() { rm -r ${PN}/extern/{configobj,ply} || die if use doc && ! use intersphinx; then for eeo in "${DISTDIR}"/*-eo-*; do { cp ${eeo} "${S}"/examples/io/${eeo##*-eo-} || die ; } ; done for ddv in "${DISTDIR}"/*-dv-*; do { cp ${ddv} "${S}"/docs/visualization/${ddv##*-dv-} || die ; } ; done for dvw in "${DISTDIR}"/*-dvw-*; do { cp ${dvw} "${S}"/docs/visualization/wcsaxes/${dvw##*-dvw-} || die ; } ; done for ddw in "${DISTDIR}"/*-dw-*; do { cp ${ddw} "${S}"/docs/wcs/${ddw##*-dw-} || die ; } ; done for ddt in "${DISTDIR}"/*-dt-*; do { cp ${ddt} "${S}"/docs/timeseries/${ddt##*-dt-} || die ; } ; done cp {"${DISTDIR}"/${PN}-eo-,"${S}"/docs/wcs/}HorseHead.fits || die cp {"${DISTDIR}"/${PN}-dvw-,"${S}"/docs/convolution/}gc_msx_e.fits || die cp {"${DISTDIR}"/${PN}-dvw-,"${S}"/docs/wcs/}l1448_13co.fits || die eapply "${FILESDIR}"/${PN}-5.3-doc-use-local-data.patch fi distutils-r1_python_prepare_all } python_configure_all() { export ASTROPY_USE_SYSTEM_ALL=1 } python_compile_all() { if use doc; then VARTEXFONTS="${T}"/fonts MPLCONFIGDIR="${T}" PYTHONPATH="${BUILD_DIR}"/install/$(python_get_sitedir) \ emake "SPHINXOPTS=$(usex intersphinx '' '-D disable_intersphinx=1')" -C docs html cp -r docs/{_static/*,_build/html/_static} || die cp -r docs/{_static/*,_build/html/_images} || die HTML_DOCS=( docs/_build/html/. ) fi } python_install_all() { if use examples; then docompress -x "/usr/share/doc/${PF}/examples" docinto examples dodoc -r examples/. fi distutils-r1_python_install_all } python_test() { pushd "${BUILD_DIR}/install/$(python_get_sitedir)" || die epytest --remote-data --run-slow popd || die } pkg_postinst() { optfeature "power a variety of features in several modules" ">=dev-python/scipy-1.5" optfeature "read/write Table objects from/to HDF5 files" dev-python/h5py optfeature "read Table objects from HTML files" dev-python/beautifulsoup4 optfeature "read Table objects from HTML files using the pandas reader" dev-python/html5lib optfeature "Used to sanitize text when disabling HTML escaping in the Table HTML writer" dev-python/bleach optfeature "validate VOTABLE XML files. This is a command line tool installed outside of Python" dev-libs/libxml2 optfeature "convert Table objects from/to pandas DataFrame objects" dev-python/pandas optfeature "Faster SCEngine indexing engine with Table, although this may still be slower in some cases than the \ default indexing engine" dev-python/sortedcontainers optfeature "specify and convert between timezones" dev-python/pytz optfeature "retrieve JPL ephemeris of Solar System objects" dev-python/jplephem optfeature "provide plotting functionality that astropy.visualization enhances" ">dev-python/matplotlib-3.5.2" optfeature "discovery of entry points which are used to insert fitters into astropy.modeling.fitting" dev-python/setuptools optfeature "the ‘kraft-burrows-nousek’ interval in poisson_conf_interval" dev-python/mpmath optfeature "Enables the serialization of various Astropy classes into a portable, hierarchical, human-readable \ representation" ">=dev-python/asdf-astropy-0.3" optfeature "Improves the performance of sigma-clipping and other functionality that may require computing statistics \ on arrays with NaN values." dev-python/bottleneck optfeature "downloading files from HTTPS or FTP+TLS sites in case Python is not able to locate up-to-date root CA \ certificates on your system; this package is usually already included in many Python installations (e.g., as a dependency of \ the requests package)." dev-python/certifi optfeature "Enables access to subsets of remote FITS files without having to download the entire file" \ ">=dev-python/fsspec-2023.4.0" optfeature "Enables access to files hosted in AWS S3 cloud storage" ">=dev-python/s3fs-2023.4.0" optfeature "testing with Matplotlib figures" dev-python/pytest-mpl optfeature "code coverage measurements" dev-python/coverage optfeature "automate testing and documentation builds" dev-python/tox optfeature "testing Solar System coordinates" dev-python/skyfield optfeature "testing satellite positions" dev-python/sgp4 optfeature "reading/writing Table objects from/to Parquet files." ">=dev-python/pyarrow-5.0.0[parquet,snappy]" }